EduXchange.nl
Het volledige minoraanbod van de LDE-instellingen voor collegejaar 2025-2026 wordt begin maart gepubliceerd op eduXchange.
  1. Onderwijsaanbod
  2. Master Level Computational Biology

Master Level Computational Biology

B-MCOBI17

Over deze cursus

During the course, the emphasis will be on composing and analysing exact models based on specific hypotheses. The results of the analyses offer an understanding of the original biological system. The models studied address fundamental questions from a variety of biological fields, including:

  • Multi-level evolution:
  • pre-biotic evolution
  • eco-evolutionary dynamics and spatial pattern formation
  • genome evolution (e.g. interaction between gene regulation and evolution)* Developmental dynamics:
  • pattern formations
  • morphogenesis and mechanical interactions between cells
  • evolution and morphogenesis* Immune system dynamics:
  • self/non-self discrimination
  • host-pathogen co-evolution* Behaviour:
  • self-structuring through local interactions
  • interface between learning and evolution
    A number of different model formalisms are used, namely:
    • (Non-linear) differential/difference equations (ODE and PDE)
    • Cellular automata machines
    • Individually oriented models
    • Evolutionary computation
      After completion the course, the student:
  • knows how computational models of dynamical systems can be used to investigate biological processes. (e.g. topics mentioned in 3). In particular;
    • the need of computational models
    • how to formulate computational models
    • how to analyze computational models
    • how to interpret results of computational models
  • knows implicit assumptions of various model formalisms. In particular:
    • ODE and PDE.
    • FSM and CA
    • event based models (e.g. Gillespie)
    • individual (particle) based models
    • evolutionary models
  • knows basic theory derived from computational modeling of
    • network dynamics (e.g. cell cycle, cell differentiation). In particular:
    • spatial pattern formation (e.g. spiral and chaotic waves)
    • multilevel evolution (genome evolution, eco-evolutionary dynamics)
    • multilevel morphogenesis (from genes, to cells to tissues to organism)
  • able to understand current literature using modeling. In particular
    • extracting the bottom line
    • evaluating the explicit and implicit assumptions of the models
    • relating the discussion to the theoretical knowledge gained in 3.

Leerresultaten

After completing the module the student is able to:

  • knows how computational models of dynamical systems can be used to investigate biological processes. (e.g.topics mentioned in 3).
    In particular;• the need of computational models• how to formulate computational models• how to analyze computational models• how to interpret results of computational models
  • knows implicit assumptions of various model formalisms.
    In particular:• ODE and PDE.• FSM and CA• event based models (e.g. Gillespie)• individual (particle) based models• evolutionary models
  • knows basic theory derived from computational modeling of• network dynamics (e.g. cell cycle, cell differentiation).
    In particular:• spatial pattern formation (e.g. spiral and chaotic waves)• multilevel evolution (genome evolution, eco-evolutionary dynamics)• multilevel morphogenesis (from genes, to cells to tissues to organism)
  • able to understand current literature using modeling. In particular• extracting the bottom line• evaluating the explicit and implicit assumptions of the models• relating the discussion to the theoretical knowledge gained in 3

Cursus inschrijving

Ben je student aan de Eindhoven University of Technology (TU/e) of Wageningen University & Research (WUR)? Schrijf je dan in voor deze cursus via eduXchange.nl

Voorkennis

Je moet voldoen aan de volgende eisen

  • Ingeschreven voor één van de volgende opleidingen
  • Bioinformatics and Biocomplexity
  • Toelatingsbeschikking voor de master toegekend

Bronnen

  • Software Linux

Aanvullende informatie

  • Studiepunten
    ECTS 7.5
  • Niveau
    master
  • Selectie course
    Nee
Als er nog iets onduidelijk is, kijk even naar de FAQ van Utrecht University.

Aanbod

  • Startdatum

    3 februari 2025

    • Einddatum
      11 april 2025
    • Periode *
      Blok 3
    • Locatie
      Utrecht
    • Voertaal
      Engels
    • Tijd info
      Monday 13:15 - 14:00, Monday 13:15 - 15:00, Monday 13:15 - 16:00, Monday 13:15 - 17:00, Monday 14:15 - 15:00, Monday 14:15 - 16:00, Monday 14:15 - 17:00, Monday 14:15 - 18:00, Monday 15:15 - 16:00, Monday 15:15 - 17:00, Monday 15:15 - 18:00, Monday 15:15 - 19:00, Monday 16:15 - 17:00, Monday 16:15 - 18:00, Monday 16:15 - 19:00, Monday 17:15 - 18:00, Monday 17:15 - 19:00, Monday 18:15 - 19:00, Tuesday 09:00 - 09:45, Tuesday 09:00 - 10:45, Tuesday 09:00 - 11:45, Tuesday 09:00 - 12:45, Tuesday 09:00 - 14:00, Tuesday 09:00 - 15:00, Tuesday 09:00 - 16:00, Tuesday 09:00 - 17:00, Tuesday 10:00 - 10:45, Tuesday 10:00 - 12:45, Tuesday 10:00 - 15:00, Tuesday 10:00 - 16:00, Tuesday 10:00 - 17:00, Tuesday 11:00 - 11:45, Tuesday 11:00 - 12:45, Tuesday 11:00 - 15:00, Tuesday 11:00 - 16:00, Tuesday 11:00 - 17:00, Tuesday 12:00 - 12:45, Tuesday 12:00 - 17:00, Tuesday 13:15 - 14:00, Tuesday 13:15 - 15:00, Tuesday 13:15 - 16:00, Tuesday 13:15 - 17:00, Tuesday 14:15 - 15:00, Tuesday 14:15 - 16:00, Tuesday 14:15 - 17:00, Tuesday 15:15 - 16:00, Tuesday 15:15 - 17:00, Tuesday 16:15 - 17:00, Thursday 09:00 - 09:45, Thursday 09:00 - 10:45, Thursday 09:00 - 11:45, Thursday 09:00 - 12:45, Thursday 09:00 - 14:00, Thursday 09:00 - 15:00, Thursday 09:00 - 16:00, Thursday 09:00 - 17:00, Thursday 10:00 - 10:45, Thursday 10:00 - 11:45, Thursday 10:00 - 12:45, Thursday 10:00 - 15:00, Thursday 10:00 - 16:00, Thursday 10:00 - 17:00, Thursday 11:00 - 11:45, Thursday 11:00 - 12:45, Thursday 11:00 - 15:00, Thursday 11:00 - 16:00, Thursday 11:00 - 17:00, Thursday 11:00 - 18:00, Thursday 12:00 - 12:45, Thursday 12:00 - 17:00, Thursday 12:00 - 18:00, Thursday 12:00 - 19:00, Thursday 13:15 - 14:00, Thursday 13:15 - 15:00, Thursday 13:15 - 16:00, Thursday 13:15 - 17:00, Thursday 13:15 - 18:00, Thursday 13:15 - 19:00, Thursday 14:05 - 19:00, Thursday 14:15 - 15:00, Thursday 14:15 - 16:00, Thursday 14:15 - 17:00, Thursday 14:15 - 18:00, Thursday 15:15 - 16:00, Thursday 15:15 - 17:00, Thursday 15:15 - 19:00, Thursday 16:15 - 17:00, Thursday 16:15 - 18:00, Thursday 16:15 - 19:00, Thursday 17:15 - 18:00, Thursday 17:15 - 19:00, Thursday 18:15 - 19:00
    Course loopt nu

  • Startdatum

    2 februari 2026

    • Einddatum
      10 april 2026
    • Periode *
      Blok 3
    • Locatie
      Utrecht
    • Voertaal
      Engels
    • Tijd info
      Monday 13:15 - 14:00, Monday 13:15 - 15:00, Monday 13:15 - 16:00, Monday 13:15 - 17:00, Monday 14:15 - 15:00, Monday 14:15 - 16:00, Monday 14:15 - 17:00, Monday 14:15 - 18:00, Monday 15:15 - 16:00, Monday 15:15 - 17:00, Monday 15:15 - 18:00, Monday 15:15 - 19:00, Monday 16:15 - 17:00, Monday 16:15 - 18:00, Monday 16:15 - 19:00, Monday 17:15 - 18:00, Monday 17:15 - 19:00, Monday 18:15 - 19:00, Tuesday 09:00 - 09:45, Tuesday 09:00 - 10:45, Tuesday 09:00 - 11:45, Tuesday 09:00 - 12:45, Tuesday 09:00 - 14:00, Tuesday 09:00 - 15:00, Tuesday 09:00 - 16:00, Tuesday 09:00 - 17:00, Tuesday 10:00 - 10:45, Tuesday 10:00 - 12:45, Tuesday 10:00 - 15:00, Tuesday 10:00 - 16:00, Tuesday 10:00 - 17:00, Tuesday 11:00 - 11:45, Tuesday 11:00 - 12:45, Tuesday 11:00 - 15:00, Tuesday 11:00 - 16:00, Tuesday 11:00 - 17:00, Tuesday 12:00 - 12:45, Tuesday 12:00 - 17:00, Tuesday 13:15 - 14:00, Tuesday 13:15 - 15:00, Tuesday 13:15 - 16:00, Tuesday 13:15 - 17:00, Tuesday 14:15 - 15:00, Tuesday 14:15 - 16:00, Tuesday 14:15 - 17:00, Tuesday 15:15 - 16:00, Tuesday 15:15 - 17:00, Tuesday 16:15 - 17:00, Thursday 09:00 - 09:45, Thursday 09:00 - 10:45, Thursday 09:00 - 11:45, Thursday 09:00 - 12:45, Thursday 09:00 - 14:00, Thursday 09:00 - 15:00, Thursday 09:00 - 16:00, Thursday 09:00 - 17:00, Thursday 10:00 - 10:45, Thursday 10:00 - 11:45, Thursday 10:00 - 12:45, Thursday 10:00 - 15:00, Thursday 10:00 - 16:00, Thursday 10:00 - 17:00, Thursday 11:00 - 11:45, Thursday 11:00 - 12:45, Thursday 11:00 - 15:00, Thursday 11:00 - 16:00, Thursday 11:00 - 17:00, Thursday 11:00 - 18:00, Thursday 12:00 - 12:45, Thursday 12:00 - 17:00, Thursday 12:00 - 18:00, Thursday 12:00 - 19:00, Thursday 13:15 - 14:00, Thursday 13:15 - 15:00, Thursday 13:15 - 16:00, Thursday 13:15 - 17:00, Thursday 13:15 - 18:00, Thursday 13:15 - 19:00, Thursday 14:05 - 19:00, Thursday 14:15 - 15:00, Thursday 14:15 - 16:00, Thursday 14:15 - 17:00, Thursday 14:15 - 18:00, Thursday 15:15 - 16:00, Thursday 15:15 - 17:00, Thursday 15:15 - 19:00, Thursday 16:15 - 17:00, Thursday 16:15 - 18:00, Thursday 16:15 - 19:00, Thursday 17:15 - 18:00, Thursday 17:15 - 19:00, Thursday 18:15 - 19:00
    Inschrijvings datums nog niet bekend
* Bekijk rooster informatie van Utrecht University
Gast inschrijvingen worden rechtstreeks behandeld door Utrecht University